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Oligoclasses package

Web09. jul 2024. · Start with the first error, and the first package that fails ** using staged installation checking for curl-config... no Cannot find curl-config ERROR: configuration failed for package ‘RCurl’ Your system requires the system dependency libcurl, and it needs the development headers for that. WebThis is not a complete answer as I've never used the oligoClasses package. But your celpath seems to point to a file rather than a path. I'd guess that celFiles is a 0 length vector. Remove the file name from the path and see what happens. Also can read.celfiles handle zipped files? From the documentation it seems to handle gzip compressed ...

Bioconductor - oligoClasses

Web12. maj 2024. · Here is my issue: I recently updated R to 4.0 for Windows 10 (64 bits) and ever since can't load any packages, no matter which ones I choose. For every package I try to load I get this error: Fehler: package or namespace load failed for ‘ggplot2’ in get (Info [i, 1], envir = env): kann Datei 'C:/Users/Sebastian Höer/Documents/R/win ... WebPackage ‘oligoClasses’ October 9, 2013 Version 1.22.0 Title Classes for high-throughput arrays supported by oligo and crlmm Author Benilton Carvalho and Robert Scharpf … lhw hotels tuscany https://tumblebunnies.net

Cannot install Oligo package - Bioconductor

Web19. jun 2024. · iranges oligoclasses BiocGenerics • 1.5k views ADD COMMENT • link 4.8 years ago GENOMIC_region • 0 2. Entering edit mode. James W. MacDonald 62k @james-w-macdonald-5106 ... If you want help, install R-3.5.0 and then install all the packages you want using biocLite. Unfortunately there isn't a 'workaround of this that can minimize ... WebError: package ‘oligoClasses’ could not be loaded I'm not sure where the problem is - whether it is with the oligoClasses or with the oligo, but I could not find any way to fix this. I would greatly appreciate any suggestions! mcelrath name pronunciation

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Oligoclasses package

unable to install bioconductor package - General - Posit Community

Weba character vector of the names of annotation packages AssayData-methods Methods for class AssayData in the oligoClasses package Description Batch statistics used for … WebSource Package: oligo_1.62.2.tar.gz: Windows Binary: oligo_1.62.2.zip: macOS Binary (x86_64) oligo_1.62.2.tgz: macOS Binary (arm64) oligo_1.62.2.tgz: Source Repository

Oligoclasses package

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WebThis package is for version 2.10 of Bioconductor; for the stable, up-to-date release version, see oligoClasses. Classes for high-throughput arrays supported by oligo and crlmm. … WebError: package or namespace load failed for ‘oligoClasses’: objects ‘open.ff’, ‘close.ff’ are not exported by 'namespace:ff' I am running rstudio from within a conda env with R 3.6.1 …

WebProperty Value; Operating system: Linux: Distribution: Ubuntu 22.04 LTS (Jammy Jellyfish) Repository: Ubuntu Universe amd64 Official: Package filename: r-bioc-oligoclasses_1.56.0-1_all.deb Webaffy oligoclasses oligo package pdinfobuilder annotationdbi updated 5.6 years ago by James W. MacDonald 62k • written 5.6 years ago by Aedin Culhane ▴ 510 2. votes. …

WebFunction used to get a list of CEL files. WebMethods defined in packages that depend on oligoClasses. Functions to convert probabilities to integers, or integers to probabilities. Number of samples for FeatureSet …

WebFile listing for oligoClasses. affyPlatforms: Available Affymetrix platforms for SNP arrays AlleleSet-class: Class "AlleleSet" AlleleSet-methods: Compute average log-intensities / …

Web22. mar 2013. · Thanks for contributing an answer to Stack Overflow! Please be sure to answer the question.Provide details and share your research! But avoid …. Asking for help, clarification, or responding to other answers. lhw insuranceWeb30. jul 2024. · BiocManager::install("oligoClasses") But when trying to load the library, I get the following error: Error: package or namespace load failed for ‘oligoClasses’: objects … lhw irelandWeboligoClasses Deprecated. manufacturer-methods. Manufacturer ID for FeatureSet-like objects. checkOrder. Checks whether a eSet-derived class is ordered by chromosome and physical position. splitIndicesByLength. Tools to distribute objects across nodes or by length. exprs-methods. Accessor for the 'exprs' slot. lhw-intraWebNEWS 3 BUGFIXES: • Rscript -e wouldfailif‘stdin’wereclosed(ReportedbyHenrikBengtsson.) • qt(*, log.p=TRUE) inoutertailsnolongerproducesNaN initsfinalsteps ... lhwinservice event id 100WebMethods for class AssayData in the oligoClasses package. Description Batch statistics used for estimating copy number are stored as AssayData in the 'batchStatistics' slot of the CNSet class. Each element in the AssayData must have the same number of rows and columns. Rows correspond to features and columns correspond to batch. l h wilson ltdWeb08. nov 2024. · affyPlatforms: Available Affymetrix platforms for SNP arrays AlleleSet-class: Class "AlleleSet" AlleleSet-methods: Compute average log-intensities / log-ratios … mcelree\\u0027s wine of carduiWebR/AllClasses.R defines the following functions: affyPlatforms: Available Affymetrix platforms for SNP arrays AlleleSet-class: Class "AlleleSet" AlleleSet-methods: Compute average … mcelree and harvey